CDS

Accession Number TCMCG024C06446
gbkey CDS
Protein Id XP_021976918.1
Location join(24358661..24358791,24359341..24360070,24360162..24360207,24360264..24360343,24360419..24360627,24361319..24361808)
Gene LOC110872433
GeneID 110872433
Organism Helianthus annuus

Protein

Length 561aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA396063
db_source XM_022121226.2
Definition probable pectate lyase 18 isoform X2 [Helianthus annuus]

EGGNOG-MAPPER Annotation

COG_category G
Description Pectate lyase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R02361        [VIEW IN KEGG]
R06240        [VIEW IN KEGG]
KEGG_rclass RC00049        [VIEW IN KEGG]
RC00705        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K01728        [VIEW IN KEGG]
EC 4.2.2.2        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00040        [VIEW IN KEGG]
ko02024        [VIEW IN KEGG]
map00040        [VIEW IN KEGG]
map02024        [VIEW IN KEGG]
GOs GO:0002376        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009814        [VIEW IN EMBL-EBI]
GO:0009825        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0016829        [VIEW IN EMBL-EBI]
GO:0016835        [VIEW IN EMBL-EBI]
GO:0016837        [VIEW IN EMBL-EBI]
GO:0030570        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031225        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042545        [VIEW IN EMBL-EBI]
GO:0042547        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0045229        [VIEW IN EMBL-EBI]
GO:0046658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0071554        [VIEW IN EMBL-EBI]
GO:0071555        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0098542        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTCCATGTGCATGCACTAGTCTCTTGACCTACATGCTTTATTTAACTTGTATATCCTCCACTTTTATTAGGGTCACCCTCCCTCATCAACACCCTGACCCAGAAGCTATTGTTCTGCAACTACAAAGGAAAGTTAATGCTTCAATAGCCTCCAGAAGACAACTACTTGAAACAAACCCATTATACATTCAATCAAAAGATCAAACTCCTTGCCAGACCGGGAACCCAGTCGACGACTGCTGGCGGTGTGACCCAAACTGGGCCAATGACCGCCAACGCCTCGCCGACTGCGCTATCGGATTTGGCCAGGGTGCAATGGGTGGCAAAGGAGGCCAAATCTACATTGTCTCAGACCCATCTGATGGAGACCCCGAAAACCCTCAACCCGGAACACTAAGACATGCTGTCATACAATCCGAGCCACTATGGATCATATTCGCGCGTGACATGCACATAAATTTAAAAACCGAGCTCATTGTCAGCAGCGCGAAAACCATCGATGGGCGTGGGGCCATCGTGCACATCACTGGAAAAGGGTGCATTGTGATTGAACATGTGGGAAACATCATCATTCATGGGCTTTATATTCATGACTGCGAGCCATCGGGGAACGCTAAGATAAGGGTGAGTCCAACAGATGTTGTGGGCAGAGGGAAATCCGACGGTGATGGATTGACAATCAAGGGGGTACGGAATTTGTGGATTGATCATTGTTCTTTTGCCAGGTGTAAAGACGGATTGGTCGATATCACAGAAGGATCTACCGCCGTGACAGTGACCAATTCTTATTTTACGGAGCATGATAAGGTCATGTTATTGGGTCATTCTGATGATTATTTGGCTGATGCTGGTATGCAGTTGCTTTCAACCACTTTGGAAAAGGGCTTGTGGAGAGAATGCCAAGATGCCATTGGTGGGAGCGCGGCTCCCACTATTAACAGTCAGGGCAACAGATTTGTTGCCCAGCCTAATTCTCATAAGGAGGTGACGAAGCGAATGGAAGCGAAGGAAGATGAATGGAGGGGGTGGAATTGGAGGACGGAAGGGGACTTGATGGTTAATGGTGCATTTTTTACGCCCTCGGGTGCTGAGTTCAGTGTTCAATATGACAAGGCGTCTAGTGTTCCGGCGATGTCGGCTTACCTTATAAACCAACTAACTATGCATGCAGGTGTCCTCGTTGGCGTCCCAAGCAATGTAGGTGACAATCCACCTCCTGGGATCATACCACCTGGTGGCGATGGCGGGGGCGGTCCTCCAATGATTATTCCACCAGTTGATGGTCAACCAAGTGGTGGCAACCCTCCAGGTACAATACCGCCTGATGGTGGTGATTATGGCTACTCTCCAAGTACAATACCTCCAGGCGGCAACCGTTATGGAGCCACACCACCAGGTTGCTACGCGCCTGGAAAAACACAAGGCGGTTGTATTCCAGGTGGTGGTGGTGATCCTGGGATGGTGTCAGGTGTTGGGTACAGTTCGGTACCAGGATCCCCACCGTTTGGGGTGCTACAAGGTTGCGGGCCTGGGATAATACCTTACTGTGGCGGTCCTGGCGGCAGAATGGTTTCAGGTGTAGGTAGCAGCATTCATACAATGACACGTTCATCAATATTAACCTCCATGCTTCTGTCTTCACTAGTTGTATTATCTACCAGTGTTGTATTCTCATTACAGTAG
Protein:  
MSPCACTSLLTYMLYLTCISSTFIRVTLPHQHPDPEAIVLQLQRKVNASIASRRQLLETNPLYIQSKDQTPCQTGNPVDDCWRCDPNWANDRQRLADCAIGFGQGAMGGKGGQIYIVSDPSDGDPENPQPGTLRHAVIQSEPLWIIFARDMHINLKTELIVSSAKTIDGRGAIVHITGKGCIVIEHVGNIIIHGLYIHDCEPSGNAKIRVSPTDVVGRGKSDGDGLTIKGVRNLWIDHCSFARCKDGLVDITEGSTAVTVTNSYFTEHDKVMLLGHSDDYLADAGMQLLSTTLEKGLWRECQDAIGGSAAPTINSQGNRFVAQPNSHKEVTKRMEAKEDEWRGWNWRTEGDLMVNGAFFTPSGAEFSVQYDKASSVPAMSAYLINQLTMHAGVLVGVPSNVGDNPPPGIIPPGGDGGGGPPMIIPPVDGQPSGGNPPGTIPPDGGDYGYSPSTIPPGGNRYGATPPGCYAPGKTQGGCIPGGGGDPGMVSGVGYSSVPGSPPFGVLQGCGPGIIPYCGGPGGRMVSGVGSSIHTMTRSSILTSMLLSSLVVLSTSVVFSLQ